The native state structures of globular proteins are stable and well packed indicating that self-interactions are favored over protein-solvent interactions under folding conditions. We use this as a guiding principle to derive the geometry of the building blocks of protein structures—α helices and strands assembled into β sheets—with no adjustable parameters, no amino acid sequence information, and no chemistry. There is an almost perfect fit between the dictates of mathematics and physics and the rules of quantum chemistry. Protein evolution is facilitated by sequence-independent platforms, which can elaborate sequence-dependent functional diversity. Our work highlights the vital role of discreteness in life and may have implications for the creation of artificial life and on the nature of life elsewhere in the cosmos.
|Data di pubblicazione:||2021|
|Titolo:||Building blocks of protein structures: Physics meets biology|
|Rivista:||PHYSICAL REVIEW. E|
|Digital Object Identifier (DOI):||http://dx.doi.org/10.1103/PhysRevE.104.014402|
|Appare nelle tipologie:||2.1 Articolo su rivista |
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|Skrbic_PRE_21_b.pdf||Skrbic_PRE_2021||Versione dell'editore||Accesso chiuso-personale||Riservato|